Green synthesis of nano-sized calcite crystals by ureolytic Acremonium egyptiacum IRAN 5247C associated with grapevine decline

Document Type : Original Article

Authors

1 Department of Biological Science, Faculty of Science, University of Kurdistan, P.O. Box 416, Sanandaj, Kurdistan, Iran

2 Department of Biological Science, Faculty of Science, University of Kurdistan, Sanadaj; Research Center for Nanotechnology, University of Kurdistan, Sanandaj, Kurdistan, Iran

3 Department of Plant Protection, Agriculture Faculty, University of Kurdistan, P.O. Box 416, Sanandaj, Kurdistan, Iran.University of Kurdistan

4 Department of Physics, College of science, University of Halabja, Kurdistan region, Iraq

5 Department of Plant Protection, Agriculture Faculty, University of Kurdistan, P.O. Box 416, Sanandaj, Kurdistan, Iran

Abstract

Nano-calcite, or calcium carbonate nanoparticles, is valued for its stability and versatile applications, particularly in agriculture, where it enhances soil quality, regulates pH, improves nutrient delivery, and promotes sustainable crop yields. In this research, nano-calcite was synthesized using Acremonium egyptiacum IRAN 5247C, isolated from grapevine necrotic wood, under sedimentary conditions through fungal urease production. Key factors including urea and calcium concentrations, pH, incubation time, and temperature were optimized using a one-factor-at-a-time (OFAT) approach, resulting in a maximum yield of 595 mg of calcite per 10 ml of solution. Field emission scanning electron microscopy (FE-SEM) imaging revealed that the nanocrystals were predominantly spherical, averaging 73.5 ± 8.02 nm in size, with a distribution range of 25 to 125 nm. X-ray diffraction (XRD) and Fourier transform infrared-Raman (FTIR-Raman) spectroscopy confirmed a well-defined crystalline calcite structure characterized by carbonate ions. This study reports the first synthesis of nano-calcite using Acremonium egyptiacum, with precise control over particle shape and size, an ideal feature for applications in concrete reinforcement, bio-cementation, and agriculture.

Keywords

Main Subjects


Abdollahzadeh, J., Goltapeh, E.M., Javadi, A., Shams-Bakhsh, M., Zare, R. and Phillips, A.J.L. 2009. Barriopsis iraniana and Phaeobotryon cupressi: two new species of the Botryosphaeriaceae from trees in Iran. Persoonia 23(1): 1–8.
Abdollahzadeh, J., Hosseini, F. and Javadi, A., 2014. New records from Botryosphaeriaceae (Ascomycota) for mycobiota of Iran. Mycologia Iranica 1(1): 43–51.
Ashengroph, M. and Rabiei, Z. 2023. Green copper carbonate nanoparticles produced by the ureolytic fungus Alternaria sp. strain ccf7 and their antibacterial activity. Jentashapir Journal of Cellular and Molecular Biology 14(2): e136448. 
Boyjoo, Y., Pareek, V.K. and Liu, J. 2014. Synthesis of micro and nano-sized calcium carbonate particles and their applications. Journal of Materials Chemistry A 2: 14270–14288.
Cai, G.B., Chen, S.F., Liu, L., Jiang, J., Bin, Yao, H., Xu, A.W. and Yu, S.H. 2010. 1,3-Diamino-2-hydroxypropane-N,N,N′,N′-tetraacetic acid stabilized amorphous calcium carbonate: nucleation, transformation and crystal growth.  CrystEngComm 12: 234–241.
Donnelly, F.C., Purcell-Milton, F., Framont, V., Cleary, O., Dunne, P.W. and Gun’ko, Y.K. 2017. Synthesis of CaCO3 nano- and micro-particles by dry ice carbonation.  Chemical Communications 53: 6657–6660.
Erdmann, N. and Strieth, D. 2023. Influencing factors on ureolytic microbiologically induced calcium carbonate precipitation for bio-cementation.  World Journal of Microbiology and Biotechnology 39: 61.
Fadia, P., Tyagi, S., Bhagat, S., Nair, A., Panchal, P., Dave, H., Dang, S. and Singh S. 2021. Calcium carbonate nano- and microparticles: synthesis methods and biological applications. 3 Biotech 11: 457.
Gandali Mostafa, N., Ghezelbash, G. and Shafiei, M. 2024. Investigating the different amounts of urea and calcium on the formation of different forms of calcium carbonate in precipitation medium using Sporosarcina pasteurii. Cellular and Molecular Research 37(1): 30–44.
Ghorbanzadeh, N., Shokati, R., Farhangi, M.B., Shabanpour, M. and Unc, A. 2021. Effect of the biogenic precipitation of calcium carbonate on bacterial transport in sand columns. Ecohydrology & Hydrobiology 21(2): 280–291.
Görgen, S., Benzerara, K., Skouri-Panet, F., Gugger, M., Chauvat, F. and Cassier-Chauvat, C. 2021. The diversity of molecular mechanisms of carbonate biomineralization by bacteria. Discover Materials 1: 2.
Guo, N., Wang, Y., Hui, X., Zhao, Q., Zeng, Z., Pan, S., Guo, Z., Yin, Y. and Liu, T. 2021. Marine bacteria inhibit corrosion of steel via synergistic biomineralization. Journal of Materials Science and Technology 66: 82–90.
Harkes, M.P., Van Paassen, L.A., Booster, J.L., Whiffin, V.S. and van Loosdrecht, M.C. 2010. Fixation and distribution of bacterial activity in sand to induce carbonate precipitation for ground reinforcement.  Ecological engineering 36: 112–117.
Hou, L.W., Giraldo, A., Groenewald, J.Z., Rämä, T., Summerbell, R.C., Huang, G.Z., Cai, L. and Crous, P.W. 2023. Redisposition of acremonium-like fungi in Hypocreales. Studies in Mycology 105: 23–203.
Karatas, I., Kavazanjian, J.E. and Rittmann, B.E. 2008. Microbially induced precipitation of calcite using Pseudomonas denitrificans. In: Proceedings of 1st bio-geo engineering conference, TU Delft and Deltares, Delft, The Netherlands. pp. 58–66.
Kim, G., Kim, J. and Youn, H. 2018. Effect of temperature, pH, and reaction duration on microbially induced calcite precipitation. Applied Sciences 8(8): 1277.
Kim, H.J., Li, X.J., Kim, D.C., Kim, T.K., Sohn, J.H., Kwon, H., Lee, D., Yim, J.H. and Oh, H. 2021. PTP1B inhibitory secondary metabolites from an antarctic fungal strain Acremonium sp. SF-7394. Molecules 26: 5505.
Konstantinou, C. and Biscontin, G. 2022. Experimental investigation of the effects of porosity, hydraulic conductivity, strength, and flow rate on fluid flow in weakly cemented bio-treated sands. Hydrology 9(11): 190.
Konstantinou, C. and Wang, Y. 2023. Unlocking the potential of microbially induced calcium carbonate precipitation (MICP) for hydrological applications: A review of opportunities, challenges, and environmental considerations. Hydrology 10(9): 178. 
Krajewska, B. 2017. Urease-aided calcium carbonate mineralization for engineering applications: A review.  Journal of Advanced Research 13: 59–67.
Kumara, K., Wathugala, D. and Hafeel, R.F. 2019. Effect of nano calcite foliar fertilizer on the growth and yield of rice (Oryza sativa). Journal of Agricultural Sciences – Sri Lanka. 14: 154.
Li, Q., Csetenyi, L., Paton, G.I. and Gadd, G.M. 2015. CaCO3 and SrCO3 bioprecipitation by fungi isolated from calcareous soil. Environmental Microbiology 17(8): 3082–3097.
Loshchinina, E.A., Vetchinkina, E.P. and Kupryashina, M.A. 2022. Diversity of biogenic nanoparticles obtained by the fungi-mediated synthesis: A review.  Biomimetics (Basel) 8(1): 1.
Motlhalamme, T., Mohamed, H., Kaningini, A.G., More, G.K., Thema, F.T. and Maaza, M. 2023. Bio-synthesized calcium carbonate (CaCO3) nanoparticles: Their anti-fungal properties and application as nanofertilizer on Lycopersicon esculentum growth and gas exchange measurements. Plant Nano Biology 6: 100050.
Ojha, N., Aich, P. and Das, N. 2021. Process optimization of microbially induced calcite precipitation by ureolytic yeast Spathospora sp. NN04 using Box-Behnken design: A novel approach towards bio-cementation.  Journal of Applied Biotechnology Reports 8(3): 303–311.
Omoregie, A.I., Ong, D.E.L. and Nissom, P.M. 2019. Assessing ureolytic bacteria with calcifying abilities isolated from limestone caves for biocalcification.  Letters in Applied Microbiology 68: 173–181.
Pérez-Cantero, A. and Guarro, J. 2020. Sarocladium and Acremonium infections: New faces of an old opportunistic fungus.  Mycoses 63(11): 1203–1214.
Qin, Y., Lu, H., Qi, X., Lin, M., Gao, C., Liu, Y. and Luo, X. 2024. Recent advances in chemistry and bioactivities of secondary metabolites from the genus Acremonium.  Journal of Fungi 10(1): 37.
Raeder, U. and Broda, P. 1985. Rapid preparation of DNA from filamentous fungi. Applied Microbiology 1: 17–20.
Rautela, R. and Rawat, S. 2020. Analysis and optimization of process parameters for in vitro biomineralization of CaCO3 by Klebsiella pneumoniae, isolated from a stalactite from the Sahastradhara cave.  RSC Advances 10(14): 8470–8479.
Render, D., Samuel, T., King, H., Vig, M., Jeelani, S., Babu, R.J. and Rangari, V. 2016. Biomaterial-derived calcium carbonate nanoparticles for enteric drug delivery. Journal of Nanomaterials 2016: 3170248.
Salehi, P., Dabbagh, H. and Ashengroph, M. 2022. Effects of microbial strains on the mechanical and durability properties of lightweight concrete reinforced with polypropylene fiber. Construction and Building Materials 322: 126519.
Sharma, H. and Ashish, D.K. 2023. Nano CaCO3 for enhancing properties of cement-based materials: A comprehensive review. Journal of Sustainable Cement-Based Materials 12(12): 1475–494. 
Shirakawa, M.A., Cincotto, M.A., Atencio, D., Gaylarde, C.C. and John, V.M. 2011. Effect of culture medium on biocalcification by Pseudomonas putida, Lysinibacillus Sphaericus and Bacillus subtilis. Brazilian Journal of Microbiology 42(2): 499-507.
Sidhu, N., Goyal, S. and Reddy, M.S. 2022. Biomineralization of cyanobacteria Synechocystis pevalekii improves the durability properties of cement mortar. AMB Express 12(1): 59.
Silva-Castro, G.A., Uad, I., Gonzalez-Martinez, A., Rivadeneyra, A., Gonzalez-Lopez, J. and Rivadeneyra, M.A. 2015. Bioprecipitation of calcium carbonate crystals by bacteria isolated from saline environments grown in culture media amended with seawater and real brine. BioMed Research International 2015: 816102.
Tian, J., Lai, D. and Zhou, L. 2017. Secondary metabolites from Acremonium fungi: Diverse structures and bioactivities.  Mini-Reviews in Medicinal Chemistry 17(7): 603–632.
Van Wylick, A., Monclaro, A.V., Elsacker, E., Vandelook, S., Rahier, H., De Laet, L., Cannella, D. and Peeters, E. 2021. A review on the potential of filamentous fungi for microbial self-healing of concrete. Fungal Biology and Biotechnology 8(1): 16.
Wang, Y., Konstantinou, C., Tang, S. Chen, H. 2023. Applications of microbial-induced carbonate precipitation: A state-of-the-art review. Biogeotechnics 1: 100008.
White, T. J., Bruns, T., Lee, S., Taylor, J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis, M. A,, Gelfand, D. H., Sninsky, J. J., White, T. J. (eds). PCR protocols: a guide to methods and applications:  315–322. Academic Press, San Diego, California.
 Zhao, P., Tian, Y., You, J., Hu, X. and Liu, Y. 2022. Recent advances of calcium carbonate nanoparticles for biomedical applications. Bioengineering 9: 691.
Volume 11, Issue 2
December 2024
Pages 19-31
  • Receive Date: 10 November 2024
  • Revise Date: 18 December 2024
  • Accept Date: 17 December 2024
  • Publish Date: 01 December 2024